Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810751.1_cds_XP_016496342.1_10573
CDS Infomation

[gene=LOC107815297] [db_xref=GeneID:107815297] [protein=E3 ubiquitin-protein ligase At1g63170-like] [protein_id=XP_016496342.1] [location=join(36173..36816,37283..37408,37489..37765,39079..39237)] [gbkey=CDS]
Sequence

ATGGCTGTTACCTCTGAAGAACTTACTCAGGAGAACCCAACCGACAGATTTCCTTTGCTC
ATGGAGCAAGCAGAAAGTCATGAGAGGAATGAACATGTTATTGATGTAGAACAAGGAGGT
GGTCCCTCATCATCAGGTTCATCTGATAATGATTCTCCTCGTGACTTGGAAATGCCCAGC
CATGAAGATAGATCGCCTGGTCGACATTCTTCATCTTCGTCCAATGATTCAAATTCTCAA
AGCCCTTCAATTGCAAGGAGAGGTGAAGGTTCTGATCGTCGTTGGAGCCCATTTAATACC
CTGTTGTGGCTTTCCATTGAGCTAGTATTCACCTTAGGACAGATTGTTGCAGCGATTGTT
GTTTTATCCTTGTCAAGAGGGGAAAACCCAGAAACCCCATTATTTGCTTGGGTTGTAGGT
TATGCAACTGGATGTGCAGCAAGCCTCCCTTTACTGTACTGGCGGTATCTTCACCGTTAC
CGAGCCACTGATCGGAGGTCAGCTCAACTGCGTCAAGGTTCCCCCCAAGTCAATTCCACT
GCAGAGCCAAACTCTTATATTACTATCTCATTGACTCGGTCCTCAGATGAGGAAGATGGT
AGAAACACATCTACAGAAATTTTGACCAGGCAAAGCAATGCAAGACTTGGTTCACTGGTA
GATCATTTCAAGATGGCCTTGGATTGCTTCTTTGCAGTGTGGTTTGTCGTTGGCAACGTT
TGGATCTTTGGGGGGCACTCATCTTCTTCTGACGCTCCCAATTTGTACAGATTATGTATA
GCTTTTCTTACCATTAGTTGCATTGGATACGCTATGCCTTTCATCTTGTGTGCAATGATA
TGTTGCTGCCTGCCTTGTATAATTTCAATCCTTGGTGTCCGTGAGAATATGCATGGAGTG
AGAGGAGCCACAGAAGAGTCCATTAATGCTCTTCCGACACATAAGTATAGGGCCAAGACC
AATGGAAACAAAAATTCAGAAGGGGAGGAAGGTGGTTTTATAGCAACTGGCACAGAGAAG
GAACGTGCTATCTCGGGAGAAGATGCAGTATGTTGTATTTGCTTAACAAAGTACGAGGAC
AATGACGAGCTAAGGGAGTTGCCTTGCTCGCATTTCTTCCATACCCAGTGTGTAGATAAA
TGGCTGAAGATTAATGCGTCTTGCCCCCTCTGCNAAAGAAAAAGGTTTTCCATTGCTCAA
ATCTGA

Peptide Sequence

PEP ID

XP_016496342.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Nicotiana tabacum]
Sequence

MAVTSEELTQENPTDRFPLLMEQAESHERNEHVIDVEQGGGPSSSGSSDNDSPRDLEMPS
HEDRSPGRHSSSSSNDSNSQSPSIARRGEGSDRRWSPFNTLLWLSIELVFTLGQIVAAIV
VLSLSRGENPETPLFAWVVGYATGCAASLPLLYWRYLHRYRATDRRSAQLRQGSPQVNST
AEPNSYITISLTRSSDEEDGRNTSTEILTRQSNARLGSLVDHFKMALDCFFAVWFVVGNV
WIFGGHSSSSDAPNLYRLCIAFLTISCIGYAMPFILCAMICCCLPCIISILGVRENMHGV
RGATEESINALPTHKYRAKTNGNKNSEGEEGGFIATGTEKERAISGEDAVCCICLTKYED
NDELRELPCSHFFHTQCVDKWLKINASCPLCXRKRFSIAQI

Transcript Sequence

Gene sequence data has not been registered.